BIMSA > Seminar on Bioinformatics
Seminar on Bioinformatics
Organizer
Shing Toung Yau
Date
30th August, 2022 ~ -
Previous Talks
Recent Progress Report
Speaker: Guo Qing Hu
Time: Monday, February 10, 2025 10:00 PM - 10:20 PM
Venue: Online
Alignment-free phylogenetics and population genetics
Speaker: Mengcen Guan
Time: Monday, February 10, 2025 9:30 PM - 10:00 PM
Venue: Online
Transformers application on classifying different types of sequence
Speaker: Xiang Shi
Time: Monday, February 10, 2025 9:00 PM - 9:30 PM
Venue: Online
An Overview of Follicular Thyroid Cancer Project
Speaker: (Tsinghua) Tao Zhou
Time: Monday, December 30, 2024 9:30 PM - 10:00 PM
Venue: Online
Multifractal Behavior of Chaos Game Representation
Speaker: Hongyu Yu
Time: Monday, December 30, 2024 9:00 PM - 9:30 PM
Venue: Online
Some advances of modeling complex traits evolution as a wave
Speaker: Qi Wu
Time: Monday, December 23, 2024 11:00 AM - 11:30 AM
Venue: Online
Unraveling Evolutionary Dynamics: Insights from In Silico Experiments on Selective Mechanisms in Controlled Environments
Speaker: Xiang Shi
Time: Monday, December 23, 2024 10:30 AM - 11:00 AM
Venue: Online
Earliest modern human genomes constrain timing of Neanderthal admixture
Speaker: Mengcen Guan
Time: Monday, December 23, 2024 10:00 AM - 10:30 AM
Venue: Online
Gene Ontology Prediction for Protein Function Annotation
Speaker: Hongyu Yu
Time: Saturday, November 30, 2024 9:00 PM - 9:30 PM
Venue: Online
PhosContext2vec:a distributed representation of residue-level sequence contexts and its application to general and kinase-specific phosphorylation site prediction
Speaker: Mengcen Guan
Time: Monday, November 25, 2024 9:30 PM - 10:00 PM
Venue: Online
Thyroid nodule data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, November 25, 2024 9:00 PM - 9:30 PM
Venue: Online
Virus classification by transformer model
Speaker: Xiang Shi
Time: Monday, November 18, 2024 9:30 PM - 10:00 PM
Venue: Online
The iterated function system and Chaos Game Representation
Speaker: Hongyu Yu
Time: Monday, November 18, 2024 9:00 PM - 9:30 PM
Venue: Online
Research on Linear disequilibrium in the different dimensions of 12-dimensional natural vector
Speaker: Mengcen Guan
Time: Monday, November 11, 2024 10:00 PM - 10:30 PM
Venue: Online
Thyroid nodule data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, November 11, 2024 9:30 PM - 10:00 PM
Venue: Online
Manifold Fitting and Its Potential Applications in the Analysis of Sequencing Data
Speaker: Yukun Lu
Time: Monday, November 11, 2024 9:00 PM - 9:30 PM
Venue: Online
Research on Linear disequilibrium in the different dimensions of 12-dimensional natural vector
Speaker: Mengcen Guan
Time: Monday, November 11, 2024 10:00 AM - 10:30 AM
Venue: Online
Thyroid nodule data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, November 11, 2024 9:30 AM - 10:00 AM
Venue: Online
Manifold Fitting and Its Potential Applications in the Analysis of Sequencing Data
Speaker: Yukun Lu
Time: Monday, November 11, 2024 9:00 AM - 9:30 AM
Venue: Online
A symmetric Natural Vector Method for Predicting Ambiguous Non-standard Base Codes and Research on gene regulatory relationships
Speaker: Guo Qing Hu
Time: Monday, November 4, 2024 10:00 AM - 10:30 AM
Venue: Online
Coding region classification by multi-view method
Speaker: Xiang Shi
Time: Monday, November 4, 2024 9:30 AM - 10:00 AM
Venue: Online
Asymmetric Natural Vector Method for Predicting Ambiguous Non-standard Base Codes and Research on gene regulatory relationships
Speaker: Guo Qing Hu
Time: Monday, November 4, 2024 9:00 AM - 9:30 AM
Venue: Online
Parameter Tuning Methods in Machine Learning
Speaker: Hongyu Yu
Time: Monday, November 4, 2024 9:00 AM - 9:30 AM
Venue: Online
Coding region classification by multi-view method
Speaker: Xiang Shi
Time: Monday, November 4, 2024 8:30 AM - 9:00 AM
Venue: Online
Parameter Tuning Methods in Machine Learning
Speaker: Hongyu Yu
Time: Monday, November 4, 2024 8:00 AM - 8:30 AM
Venue: Online
Enabling Drug Response Annotations Using SCAD
Speaker: Nan Sun
Time: Monday, October 28, 2024 9:00 AM - 9:30 AM
Venue: Online
Recent progress on research of population structure of three typical population:Yoruba, British and Han Chinese through natural vector method
Speaker: Mengcen Guan
Time: Monday, October 28, 2024 8:30 AM - 9:00 AM
Venue: Online
Thyroid nodule data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, October 28, 2024 8:00 AM - 8:30 AM
Venue: Online
Asymmetric Natural Vector Method for Predicting Ambiguous Non-standard Base Codes
Speaker: Guo Qing Hu
Time: Monday, October 21, 2024 9:00 PM - 9:30 PM
Venue: Online
Recent progress on the MDD and Antibody project
Speaker: Xin Zhao
Time: Monday, October 21, 2024 8:30 PM - 9:00 PM
Venue: Online
Detection of SARS-CoV-2 High-Risk Variants
Speaker: Hongyu Yu
Time: Monday, October 21, 2024 8:00 PM - 8:30 PM
Venue: Online
EXON-INTRON pattern analysis
Speaker: Guo Qing Hu
Time: Monday, October 14, 2024 9:00 PM - 9:30 PM
Venue: Online
Classification accuracy of natural vector compared with k-mer
Speaker: Xiang Shi
Time: Monday, October 14, 2024 8:30 PM - 9:00 PM
Venue: Online
Recent progress on the grand project
Speaker: Hongyu Yu
Time: Monday, October 14, 2024 8:00 PM - 8:30 PM
Venue: Online
抗原抗体结合强度预测的机器学习方法
Speaker: Yi Shuai Niu
Time: Monday, October 7, 2024 9:00 PM - 9:30 PM
Venue: Online
Some development of convex hull analysis
Speaker: Hongyu Yu
Time: Monday, October 7, 2024 8:30 PM - 9:00 PM
Venue: Online
Some development of convex hull analysis
Speaker: Hongyu Yu
Time: Monday, October 7, 2024 8:30 PM - 9:00 PM
Venue: Online
Some progress on the project of exon and intron discrimination
Speaker: Mengcen Guan
Time: Monday, October 7, 2024 8:00 PM - 8:30 PM
Venue: Online
Report a Paper:A topology-based network tree for the prediction of protein–protein binding affinity changes following mutation
Speaker: Nan Sun
Time: Monday, September 30, 2024 9:00 PM - 9:30 PM
Venue: Online
How to run ESM-2 and other machine learning modelsin Hugging Face
Speaker: Hongyu Yu
Time: Monday, September 30, 2024 8:30 PM - 9:00 PM
Venue: Online
Thyroid nodule data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, September 30, 2024 8:00 PM - 8:30 PM
Venue: Online
Fasta sequence mutation and insertion initial analysis
Speaker: Guo Qing Hu
Time: Monday, September 23, 2024 9:00 PM - 9:30 PM
Venue: Online
Single-cell RNA-seq denoising using a deep count autoencoder
Speaker: Xiang Shi
Time: Monday, September 23, 2024 8:30 PM - 9:00 PM
Venue: Online
Some progress on the project of exon and intron discrimination
Speaker: Mengcen Guan
Time: Monday, September 23, 2024 8:00 PM - 8:30 PM
Venue: Online
Introduction to scAMF:applying manifold fitting to scRNA seq data clustering
Speaker: (Tsinghua) Tao Zhou
Time: Sunday, September 15, 2024 3:30 PM - 4:00 PM
Venue: Online
NV method used for recovery masked genome
Speaker: Guo Qing Hu
Time: Monday, September 9, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304 ；腾讯会议号409-8700-4974
Single-sequence protein structure prediction using supervised transformer protein language models
Speaker: Xiang Shi
Time: Monday, September 9, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304 ；腾讯会议号409-8700-4974
Antibodies of SARS-CoV-2
Speaker: Hongyu Yu
Time: Monday, September 9, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304 ；腾讯会议号409-8700-4974
Antibodies of SARS-CoV-2
Speaker: Hongyu Yu
Time: Monday, September 2, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304 ；腾讯会议号409-8700-4974
Discrete wavelet transform de-noising in eukaryotic gene splicing
Speaker: Mengcen Guan
Time: Monday, September 2, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304 ；腾讯会议号409-8700-4974
基于自然向量对复杂性状进行表型关联的探讨
Speaker: Qi Wu
Time: Monday, July 1, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Spectral Cluster Supertree: Fast and Statistically Robust Merging of Rooted Phylogenetic Trees
Speaker: Xiang Shi
Time: Monday, June 24, 2024 4:00 PM - 4:30 PM
Venue: 理科楼A-304
Microbial Protein-tyrosine Kinases
Speaker: Mengcen Guan
Time: Monday, June 24, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
迁徙动物磁航相关蛋白质序列与3D结构数据库整理
Speaker: Piyu Zhou
Time: Monday, June 24, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Detecting New DNA Sequences with Moment Vectors in a Given Convex Hull
Speaker: Zeju Sun
Time: Monday, June 24, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
3D Genome Reconstruction from Partially Phased Hi-C Data
Speaker: Nan Sun
Time: Sunday, June 16, 2024 4:00 PM - 4:30 PM
Venue: 理科楼A-304
The effect of gene selection on the single-cell convex hull principle
Speaker: (Tsinghua) Tao Zhou
Time: Sunday, June 16, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Protein function prediction using the Gene Ontology
Speaker: Hongyu Yu
Time: Sunday, June 16, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Determining Genome or Protein Composition Using Natural Vectors and Convex Hulls
Speaker: Xiao Pei Jiao
Time: Sunday, June 16, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Multi-scale natural vector and brief introduction to migratory animals
Speaker: Xiang Shi
Time: Monday, June 10, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection
Speaker: Mengcen Guan
Time: Monday, June 10, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
A model of population genetics and its mathematical relation to quantum theory
Speaker: Nan Sun
Time: Monday, June 3, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Knot theory and its application in biology
Speaker: Hongyu Yu
Time: Monday, June 3, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Multi-scale natural vector
Speaker: Xiang Shi
Time: Monday, May 27, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection
Speaker: Mengcen Guan
Time: Monday, May 27, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Grand biological universe paper revision
Speaker: Nan Sun
Time: Monday, May 20, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Progression on new variant identification
Speaker: Hongyu Yu
Time: Monday, May 20, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Mamba in a nutshell
Speaker: (Tsinghua) Tao Zhou
Time: Monday, May 20, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris
Speaker: Xiang Shi
Time: Monday, May 13, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Detection of protein-protein interactions from amino acid sequences using a rotation forest model with a novel pr-lpq descriptor
Speaker: Mengcen Guan
Time: Monday, May 13, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Cellular automaton and Conway's game
Speaker: Hongyu Yu
Time: Monday, May 6, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Single Cell Convex Hull Exploration: Continued
Speaker: (Tsinghua) Tao Zhou
Time: Monday, May 6, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
A new vector for representing proteins related to phosphorylation process
Speaker: Mengcen Guan
Time: Tuesday, April 30, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Transformer for one stop interpretable cell type annotation
Speaker: Xiang Shi
Time: Tuesday, April 30, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
scFed: federated learning for cell type classification with scRNA-seq
Speaker: Nan Sun
Time: Tuesday, April 30, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
New variant identification for virus
Speaker: Hongyu Yu
Time: Monday, April 22, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Single Cell Convex Hull Continued
Speaker: (Tsinghua) Tao Zhou
Time: Monday, April 22, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
A Layout Framework for scNV
Speaker: Xiang Shi
Time: Sunday, April 14, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Pan-cancer single-cell landscape of tumor-infiltrating T cells
Speaker: Nan Sun
Time: Sunday, April 14, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Direct coupling analysis and intrinsically disordered proteins' structure
Speaker: Hongyu Yu
Time: Monday, April 8, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
A Layout Framework for genome-wide Multiple Sequence Alignment Graphs
Speaker: Xiang Shi
Time: Monday, April 1, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Data collection of ancient humans
Speaker: Mengcen Guan
Time: Monday, April 1, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Deep transfer learning of cancer drug responses by integrating bulk and single-cell RNA-seq data
Speaker: Nan Sun
Time: Monday, April 1, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Deep transfer learning of cancer drug responses by integrating bulk and single-cell RNA-seq data
Speaker: Nan Sun
Time: Monday, March 25, 2024 3:30 PM - 4:00 PM
Venue: 理科楼A-304
Issues about Data Collection in single-cell Nature Vector Convex Hull Analysis
Speaker: (Tsinghua) Tao Zhou
Time: Monday, March 25, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
K-mer methods and their applications
Speaker: Hongyu Yu
Time: Monday, March 25, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
DNA analysis of an early modern human from Tianyuan Cave, China
Speaker: Mengcen Guan
Time: Monday, March 18, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
Unsupervised identification of significant lineages of SARS-CoV-2 through scalable machine learning methods
Speaker: Xiang Shi
Time: Monday, March 18, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
Disentangling single-cell omics representation with a power spectral density-based feature extraction
Speaker: Nan Sun
Time: Monday, March 11, 2024 3:00 PM - 3:30 PM
Venue: 理科楼A-304
A deeper view of gene ontology
Speaker: Hongyu Yu
Time: Monday, March 11, 2024 2:30 PM - 3:00 PM
Venue: 理科楼A-304
The protein tyrosine kinase family of the human genome
Speaker: Mengcen Guan
Time: Thursday, February 29, 2024 10:00 PM - 10:30 PM
Venue: Online
Application of cgr and structural similarity index on biological sequence classification
Speaker: Xiang Shi
Time: Thursday, February 29, 2024 9:30 PM - 10:00 PM
Venue: Online
Convex hull method may be useful in scRNA seq data analysis
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, February 29, 2024 9:00 PM - 9:30 PM
Venue: Online
Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations
Speaker: Nan Sun
Time: Thursday, February 22, 2024 10:00 PM - 10:30 PM
Venue: Online
Application of cgr and structural similarity index on biological sequence classification.
Speaker: Xiang Shi
Time: Thursday, February 22, 2024 9:30 PM - 10:00 PM
Venue: Online
Application of cgr and structural similarity index on biological sequence classification
Speaker: Xiang Shi
Time: Thursday, February 22, 2024 9:30 PM - 10:00 PM
Venue: Online
Pseudotime analysis
Speaker: Hongyu Yu
Time: Thursday, February 22, 2024 9:00 PM - 9:30 PM
Venue: Online
Pseudotime analysis
Speaker: Hongyu Yu
Time: Thursday, February 22, 2024 9:00 PM - 9:30 PM
Venue: Online
Recent progress of the kinase and phosphatase project
Speaker: Mengcen Guan
Time: Thursday, February 15, 2024 10:00 PM - 10:30 PM
Venue: Online
Application of cgr and structural similarity index on biological sequence classification.
Speaker: Xiang Shi
Time: Thursday, February 15, 2024 9:30 PM - 10:00 PM
Venue: Online
Single-cell RNA-sequencing (scRNA-seq) data integration
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, February 15, 2024 9:00 PM - 9:30 PM
Venue: Online
Recent progress of the kinase and phosphatase project
Speaker: Mengcen Guan
Time: Thursday, February 8, 2024 10:30 PM - 11:00 PM
Venue: Online
Chromosome fusion recognition for synthetic fusion scenarios
Speaker: Hongyu Yu
Time: Thursday, February 8, 2024 10:00 PM - 10:30 PM
Venue: Online
Wavelet Transforms Applications
Speaker: Guo Qing Hu
Time: Thursday, February 8, 2024 9:00 PM - 10:00 PM
Venue: Online
A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors
Speaker: Nan Sun
Time: Thursday, February 1, 2024 10:00 PM - 10:30 PM
Venue: Online
'Wildly weird' RNA bits discovered infesting the microbes in our guts.
Speaker: Xiang Shi
Time: Thursday, February 1, 2024 9:30 PM - 10:00 PM
Venue: Online
Attempts on Applying Natural Vector Method to scRNA-seq Data Analysis
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, February 1, 2024 9:00 PM - 9:30 PM
Venue: Online
Comparison of storage size of DNA sequences with different compression methods
Speaker: Xiajing Peng
Time: Saturday, January 27, 2024 10:00 PM - 10:20 PM
Venue: Online
Three recent progress report
Speaker: Guo Qing Hu
Time: Saturday, January 27, 2024 9:30 PM - 10:00 PM
Venue: Online
The single-cell convex hull principle: further discussion
Speaker: (Tsinghua) Tao Zhou
Time: Saturday, January 27, 2024 9:00 PM - 9:30 PM
Venue: Online
A review of clustering techniques
Speaker: Hongyu Yu
Time: Thursday, January 25, 2024 9:30 PM - 10:00 PM
Venue: Online
Application of Wavelet Transform and its Advantages Compared to Fourier Transform
Speaker: Mengcen Guan
Time: Thursday, January 25, 2024 9:00 PM - 9:30 PM
Venue: Online
Two recent progress report
Speaker: Guo Qing Hu
Time: Saturday, January 20, 2024 10:00 PM - 10:30 PM
Venue: Online
Evolutionary dynamics of polygenic traits in finite populations under natural selection
Speaker: Qi Wu
Time: Saturday, January 20, 2024 9:30 PM - 10:00 PM
Venue: Online
An Efficient Algorithm for Computational Protein Design Problem
Speaker: Yi Shuai Niu
Time: Saturday, January 20, 2024 9:00 PM - 9:30 PM
Venue: Online
SSNMDI: a novel joint learning model of semi-supervised non-negative matrix factorization and data imputation for clustering of single-cell RNA-seq data
Speaker: Nan Sun
Time: Thursday, January 18, 2024 10:00 PM - 10:30 PM
Venue: Online
Application of cgr and neural networks on splicing sites and clinical data
Speaker: Xiang Shi
Time: Thursday, January 18, 2024 9:30 PM - 10:00 PM
Venue: Online
Manifold fitting for natural vectors: recent progress
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, January 18, 2024 9:00 PM - 9:30 PM
Venue: Online
Review of Protein Domain Identification
Speaker: Hongyu Yu
Time: Saturday, January 13, 2024 9:40 PM - 10:00 PM
Venue: Online
Multi-perspective Natural Vector Paper
Speaker: Xiang Shi
Time: Saturday, January 13, 2024 9:20 PM - 9:40 PM
Venue: Online
Implementation of Sliding-window-based Accelerated Asymmetric Natural Vector Algorithm and Comparison with Formula-Derivation-based
Speaker: Piyu Zhou
Time: Saturday, January 13, 2024 9:00 PM - 9:20 PM
Venue: Online
Predicting multiple protein structure
Speaker: Hongyu Yu
Time: Thursday, January 11, 2024 9:30 PM - 10:00 PM
Venue: Online
Searching for the Origins of Life Detecting RNA Life Signatures Using Learning Vector Quantization
Speaker: Mengcen Guan
Time: Thursday, January 11, 2024 9:00 PM - 9:30 PM
Venue: Online
Multi-perspective Natural Vector Paper
Speaker: Xiang Shi
Time: Saturday, January 6, 2024 10:00 PM - 10:15 PM
Venue: Online
Energy entropy vector: an efficient method for coding and classifying unpaired gene sequences
Speaker: Hao Wang
Time: Saturday, January 6, 2024 9:30 PM - 10:00 PM
Venue: Online
Generalized-Locus and Generalized-Alleles(GLGA) Model Based on the Alignment-free Method: Natural Vector
Speaker: Mengcen Guan
Time: Saturday, January 6, 2024 9:00 PM - 9:30 PM
Venue: Online
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
Speaker: Nan Sun
Time: Thursday, January 4, 2024 10:00 PM - 10:30 PM
Venue: Online
Use of 3D chaos game representation to quantify DNA sequence similarity with applications for hierarchical clustering
Speaker: Xiang Shi
Time: Thursday, January 4, 2024 9:30 PM - 10:00 PM
Venue: Online
Introduction to cell representation learning via contrastive learning
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, January 4, 2024 9:00 PM - 9:30 PM
Venue: Online
Predicting multiple protein structure
Speaker: Hongyu Yu
Time: Saturday, December 30, 2023 9:30 PM - 10:00 PM
Venue: Online
scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses
Speaker: Nan Sun
Time: Tuesday, December 19, 2023 4:00 PM - 4:30 PM
Venue: Online
Evaluation of Large Language Models as a Diagnostic Aid for Complex Medical Cases
Speaker: Xiang Shi
Time: Tuesday, December 19, 2023 3:30 PM - 4:00 PM
Venue: Online
Paper review: about two approaches to the synthesis of 2D binary identifiers of DNA-associated symbol sequences
Speaker: (Tsinghua) Tao Zhou
Time: Tuesday, December 19, 2023 3:00 PM - 3:30 PM
Venue: Online
The non-uniqueness of NJ tree
Speaker: Hongyu Yu
Time: Thursday, November 30, 2023 9:30 PM - 10:00 PM
Venue: Online
An alignment-free method to find and visualize rearrangements between pairs of DNA sequences
Speaker: Mengcen Guan
Time: Thursday, November 30, 2023 9:00 PM - 9:30 PM
Venue: Online
Self-supervised learning on millions of pre-mRNA sequences improves sequence-based RNA splicing prediction
Speaker: Nan Sun
Time: Thursday, November 23, 2023 10:00 PM - 10:30 PM
Venue: Online
Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases
Speaker: Xiang Shi
Time: Thursday, November 23, 2023 9:30 PM - 10:00 PM
Venue: Online
A literature survey of methods for categorizing DNA structural regions
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, November 23, 2023 9:00 PM - 9:30 PM
Venue: Online
Taxonomic categorization based on deep learning
Speaker: Hongyu Yu
Time: Thursday, November 16, 2023 9:30 PM - 10:00 PM
Venue: Online
MicrobiomeGWAS: A Tool for Identifying Host Genetic Variants Associated with Microbiome Composition
Speaker: Mengcen Guan
Time: Thursday, November 16, 2023 9:00 PM - 9:30 PM
Venue: Online
Application of natural vector on Respiratory Syncytial virus classification
Speaker: Xiang Shi
Time: Thursday, November 9, 2023 9:30 PM - 10:00 PM
Venue: Online
Review on a paper about comparative study of plant genome assembly
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, November 9, 2023 9:00 PM - 9:30 PM
Venue: Online
Alignment-free methods and their effects on virus classification
Speaker: Hongyu Yu
Time: Thursday, November 2, 2023 8:30 PM - 9:00 PM
Venue: Online
Recent discovery in the convex hull intersection
Speaker: Mengcen Guan
Time: Thursday, November 2, 2023 8:00 PM - 8:30 PM
Venue: Online
Self-supervised learning on millions of pre-mRNA sequences improves sequence-based RNA splicing prediction
Speaker: Nan Sun
Time: Thursday, October 26, 2023 10:00 PM - 10:30 PM
Venue: Online
Analysis of drug effect on specific genes and development of treatment plan for new patients
Speaker: Nan Sun
Time: Thursday, October 26, 2023 9:00 PM - 9:30 PM
Venue: Online
A summary report on COPD project
Speaker: Xiang Shi
Time: Thursday, October 26, 2023 8:30 PM - 9:00 PM
Venue: Online
Between natural metric and natural-vector-fitted manifold
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, October 26, 2023 8:00 PM - 8:30 PM
Venue: Online
A improvement for whole genome phylogenetic analysis using Fourier transform by leading into kmer
Speaker: Mengcen Guan
Time: Thursday, October 19, 2023 9:00 PM - 9:30 PM
Venue: Online
Report on the progress of promoter project
Speaker: Ruohan Ren
Time: Thursday, October 19, 2023 8:30 PM - 9:00 PM
Venue: Online
Automated recognition of chromosome fusion using an alignment-free approach
Speaker: Hongyu Yu
Time: Thursday, October 19, 2023 8:00 PM - 8:30 PM
Venue: Online
A summary report on GISAID project
Speaker: Mengcen Guan
Time: Thursday, September 21, 2023 8:30 PM - 9:00 PM
Venue: Online
Chromosome fusing
Speaker: Hongyu Yu
Time: Thursday, September 21, 2023 8:00 PM - 8:30 PM
Venue: Online
Results of machine learning methods on CPHS data
Speaker: Xiang Shi
Time: Thursday, September 14, 2023 4:00 PM - 4:30 PM
Venue: Online
An Introduction to Michaelis-Menten Kinetics
Speaker: Nan Sun
Time: Thursday, September 14, 2023 3:30 PM - 4:00 PM
Venue: Online
Towards a unified logic underlying cell type identity
Speaker: Ruohan Ren
Time: Thursday, September 14, 2023 3:00 PM - 3:30 PM
Venue: Online
Manifold fitting in genome sequence analyzing
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, September 14, 2023 2:30 PM - 3:00 PM
Venue: Online
Towards a unified logic underlying cell type identity
Speaker: Ruohan Ren
Time: Thursday, September 7, 2023 3:30 PM - 4:00 PM
Venue: Online
Results of convex hull principle analysis and 1NN classification of Kinase proteins and Phosphatase proteins
Speaker: Mengcen Guan
Time: Thursday, September 7, 2023 3:00 PM - 3:30 PM
Venue: Online
MSA based on genetic algorithm
Speaker: Hongyu Yu
Time: Thursday, September 7, 2023 2:30 PM - 3:00 PM
Venue: Online
Convolutional Neural Network and Language Model based Sequential CT Image Captioning for Intracerebral Hemorrhage
Speaker: Xiang Shi
Time: Thursday, August 31, 2023 3:30 PM - 4:00 PM
Venue: Online
Brief Introduction to Whole Exome Sequencing Data Analysis
Speaker: Nan Sun
Time: Thursday, August 31, 2023 3:00 PM - 3:30 PM
Venue: Online
Brief Introduction to Whole Exome Sequencing Data Analysis
Speaker: Nan Sun
Time: Thursday, August 31, 2023 3:00 PM - 3:30 PM
Venue: Online
Manifold fitting in genome sequence analysing
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, August 31, 2023 2:30 PM - 3:00 PM
Venue: Online
Manifold fitting in genome sequence analysing
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, August 31, 2023 2:30 PM - 3:00 PM
Venue: Online
White matter fiber tract segmentation
Speaker: Hongyu Yu
Time: Friday, August 25, 2023 3:00 PM - 3:20 PM
Venue: Online
My Progress on Classification of Protein
Speaker: An Yang
Time: Friday, August 25, 2023 2:50 PM - 3:00 PM
Venue: Online
The recent progress of 1000 Genomes Project
Speaker: Mengcen Guan
Time: Friday, August 25, 2023 2:30 PM - 2:50 PM
Venue: Online
Recent progress on the GENOMES1000 dataset
Speaker: Mengcen Guan
Time: Thursday, June 29, 2023 3:30 PM - 4:00 PM
Venue: Online
An introduction to the structure of protein complex
Speaker: Hongyu Yu
Time: Thursday, June 29, 2023 3:00 PM - 3:20 PM
Venue: Online
The development of Proteomics in China
Speaker: Nan Sun
Time: Thursday, June 29, 2023 2:45 PM - 3:00 PM
Venue: Online
The final manuscript of Grand Project
Speaker: Ruohan Ren
Time: Thursday, June 29, 2023 2:30 PM - 2:45 PM
Venue: Online
Introduction to Human metapneumovirus
Speaker: Xiang Shi
Time: Thursday, June 22, 2023 3:00 PM - 3:20 PM
Venue: Online
FCGR-SD Project Updates
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, June 22, 2023 2:30 PM - 3:00 PM
Venue: Online
Phylogenetic analysis for virus based on the optimal weight
Speaker: Hongyu Yu
Time: Wednesday, June 7, 2023 3:10 PM - 3:30 PM
Venue: Online
Summary of FCGR-SD project and progress in GPCR project
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, June 7, 2023 2:30 PM - 2:55 PM
Venue: Online
Performance of cardiovascular disease risk prediction equations in more than 14000 survivors of cancer in New Zealand primary care
Speaker: Xiang Shi
Time: Thursday, June 1, 2023 3:00 PM - 3:30 PM
Venue: Online
Recent progress on HIV-1 project
Speaker: Mengcen Guan
Time: Thursday, June 1, 2023 2:30 PM - 3:00 PM
Venue: Online
The disadvantages of Alphafold2
Speaker: Hongyu Yu
Time: Thursday, May 25, 2023 3:00 PM - 3:30 PM
Venue: Online
Genomic GPS: using genetic distance from individuals to public data for genomic analysis without disclosing personal genomes
Speaker: Nan Sun
Time: Thursday, May 18, 2023 3:00 PM - 3:30 PM
Venue: Online
Troubleshooting the installation process of Unifold on r750-1 server
Speaker: Nan Sun
Time: Thursday, May 11, 2023 3:00 PM - 3:30 PM
Venue: Online
Combining Protein Structure Similarity Measures and Natural Vector for Potential GPCR Identification
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, May 11, 2023 2:30 PM - 3:00 PM
Venue: Online
Distances in Biological Universe
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, April 27, 2023 2:30 PM - 3:00 PM
Venue: Online
The MDS problem
Speaker: Hongyu Yu
Time: Sunday, April 23, 2023 11:00 AM - 11:30 AM
Venue: Online
An Alignment-Free Method for Detection of Missing Regions for Phylogenetic Analysis
Speaker: Mengcen Guan
Time: Sunday, April 23, 2023 10:30 AM - 11:00 AM
Venue: Online
Protein backbone torsion angle prediction
Speaker: Hongyu Yu
Time: Thursday, April 13, 2023 3:10 PM - 3:30 PM
Venue: Online
Biological sequence comparative methods and their applications
Speaker: Nan Sun
Time: Thursday, April 13, 2023 2:50 PM - 3:10 PM
Venue: Online
A Summary on Family-Scale Phylogeny of Bacteria and Fungi by Natural Metric
Speaker: (Tsinghua) Tao Zhou
Time: Thursday, April 13, 2023 2:30 PM - 2:50 PM
Venue: Online
Phylogenetic tree of plant at the family level
Speaker: Nan Sun
Time: Wednesday, March 22, 2023 8:30 PM - 8:50 PM
Venue: Online
Review on a paper about Molecular Docking, Synthesis and In-vitro antimicrobial evaluation
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, March 22, 2023 8:00 PM - 8:30 PM
Venue: Online
The introduction to the structure of Alphafold2
Speaker: Hongyu Yu
Time: Wednesday, March 15, 2023 8:30 PM - 9:00 PM
Venue: Online
Brief report of recent progress on the HIV project
Speaker: Mengcen Guan
Time: Wednesday, March 15, 2023 8:00 PM - 8:30 PM
Venue: Online
The progress on HIV antibody project
Speaker: Nan Sun
Time: Wednesday, March 1, 2023 9:30 PM - 10:00 PM
Venue: Online
Brief introduction of HIV-1 antibodies
Speaker: Mengcen Guan
Time: Wednesday, March 1, 2023 9:00 PM - 9:30 PM
Venue: Online
3D genome structure from Hi-C data
Speaker: Hongyu Yu
Time: Wednesday, February 22, 2023 9:00 PM - 9:30 PM
Venue: Online
A brief introduction of alphafold2
Speaker: Hongyu Yu
Time: Wednesday, February 15, 2023 9:00 PM - 10:00 PM
Venue: Online
The Ecology and Evolution of the Baker’s Yeast Saccharomyces cerevisiae
Speaker: Mengcen Guan
Time: Wednesday, February 8, 2023 9:00 PM - 9:30 PM
Venue: Online
The optimal metric and the weight training skill
Speaker: Hongyu Yu
Time: Wednesday, February 1, 2023 9:35 PM - 9:45 PM
Venue: Online
The progress of the Grand Biological Map project
Speaker: Nan Sun
Time: Wednesday, February 1, 2023 9:25 PM - 9:35 PM
Venue: Online
An introduction to selection techniques for truncated SVD
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, February 1, 2023 9:00 PM - 9:25 PM
Venue: Online
A new distance measurement and its application in K-Means Algorithm
Speaker: Xiang Shi
Time: Wednesday, January 11, 2023 9:30 PM - 10:00 PM
Venue: Online
Recent progress in mtDNA project
Speaker: Mengcen Guan
Time: Wednesday, January 11, 2023 9:00 PM - 9:30 PM
Venue: Online
Radiation of Human Mitochondria DNA Types Analyzed by Restriction Endonuclease Cleavage Patterns
Speaker: Mengcen Guan
Time: Wednesday, December 28, 2022 9:00 PM - 10:00 PM
Venue: Online
Auxiliary diagnosis model of the lung diseases based on AI methods
Speaker: Nan Sun
Time: Wednesday, December 7, 2022 9:30 PM - 10:00 PM
Venue: Online
Review on PacBio's webinar 'New whole genome sequencing library prep for PacBio HiFi sequencing'
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, December 7, 2022 9:00 PM - 9:30 PM
Venue: Online
The maximum genetic diversity theory of molecular evolution
Speaker: Mengcen Guan
Time: Wednesday, November 30, 2022 9:30 PM - 10:00 PM
Venue: Online
a continuous approximation of 1NN accuracy and weight training
Speaker: Hongyu Yu
Time: Wednesday, November 30, 2022 9:00 PM - 9:30 PM
Venue: Online
The progress of the grand project
Speaker: Nan Sun
Time: Wednesday, November 23, 2022 9:45 PM - 10:00 PM
Venue: Online
Investigate on changes of lifestyle, adiposity and cardiometabolic markers of Sweden young adults during the COVID-19 pandemic
Speaker: Xiang Shi
Time: Wednesday, November 23, 2022 9:25 PM - 9:45 PM
Venue: Online
Subspace methods based on FCGR for alignment-free sequence analysing
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, November 23, 2022 9:00 PM - 9:25 PM
Venue: Online
Recent progress in mtDNA project
Speaker: Mengcen Guan
Time: Wednesday, November 16, 2022 9:30 PM - 10:00 PM
Venue: Online Online: Tencent 801 3489 7723 Password:
The deconvolution method of convex analysis of the mixture
Speaker: Hongyu Yu
Time: Wednesday, November 16, 2022 9:00 PM - 9:30 PM
Venue: Online Online: Tencent 801 3489 7723 Password:
Constructing a stereometric model of signaling from DNA to multimorbidity
Speaker: (Tsinghua) Tao Zhou
Time: Sunday, October 2, 2022 10:30 AM - 11:00 AM
Venue: Online Online: Tencent 801 3489 7723 Password:
Report a paper: Persistent spectral hypergraph based machine learning (PSH-ML) for protein-ligand binding affinity prediction
Speaker: Nan Sun
Time: Sunday, October 2, 2022 10:00 AM - 10:30 AM
Venue: Online Online: Tencent 801 3489 7723 Password:
FCGR-SD Project Continued: Some New Progress
Speaker: (Tsinghua) Tao Zhou
Time: Wednesday, September 14, 2022 3:00 PM - 3:30 PM
Venue: Online Online: Tencent 801 3489 7723 Password:
The geometric analysis of SARS-CoV-2
Speaker: Nan Sun
Time: Wednesday, September 14, 2022 2:30 PM - 3:00 PM
Venue: Online Online: Tencent 801 3489 7723 Password:
Prediction of binding free energy changes of viral surface proteins and host receptor proteins
Speaker: Ruohan Ren
Time: Tuesday, September 6, 2022 3:30 PM - 4:00 PM
Venue: Online Online: Tencent 801 3489 7723 Password:
The discussion on the Out of Africa hypothesis, OOAH and PPA (Progressive Phylogenetic Analysis), that identified the African human populations as paraphyletic
Speaker: Mengcen Guan
Time: Tuesday, September 6, 2022 3:00 PM - 3:30 PM
Venue: Online Online: Tencent 801 3489 7723 Password: