BIMSA > Seminar on Bioinformatics A new vector for representing proteins related to phosphorylation process
A new vector for representing proteins related to phosphorylation process
Organizer
Shing Toung Yau
Speaker
Mengcen Guan
Time
Tuesday, April 30, 2024 3:30 PM - 4:00 PM
Venue
理科楼A-304
Abstract
To represent proteins related to phosphorylation: kinases, phosphatase, phosphoprotein-binding domain, I have tried several vectors, such as natural vectors with different order moments. The clustering/classification results are not unsatisfactory. The KNN result of phosphatase dataset is only 0.8576. Then I considered physicochemical properties of 20 amino acids and added these to our natural vectors. I will report the method and its results in this seminar.